Software list

Software for research

The following software is often used by researchers. Most of this software is installed on the High Performance clusters but some programs are also available on other platforms.

GATK

Geonome Analysis

The Genome Analysis Toolkit or GATK is a software package used to analyse next-generation resequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance.