Loading content, please wait..
loading..
Logo
Version 3.18
or
Publication Type J
Authors Oliveira, V; Gomes, NCM; Almeida, A; Silva, AMS; Silva, H; Cunha, A
Author Full Name Oliveira, Vanessa; Gomes, Newton C. M.; Almeida, Adelaide; Silva, Artur M. S.; Silva, Helena; Cunha, Angela
Title Microbe-Assisted Phytoremediation of Hydrocarbons in Estuarine Environments
Source MICROBIAL ECOLOGY
Language English
Document Type Review
Keywords Plus POLYCYCLIC AROMATIC-HYDROCARBONS; SALT-MARSH PLANTS; METHOD AFFECTS COLONIZATION; HEAVY-METAL CONTAMINATION; REAL-TIME PCR; CRUDE-OIL; BACTERIAL COMMUNITIES; ENDOPHYTIC BACTERIA; ORGANIC POLLUTANTS; ENHANCED PHYTOREMEDIATION
Abstract Estuaries are sinks for various anthropogenic contaminants, such as petroleum hydrocarbons, giving rise to significant environmental concern. The demand for organisms and processes capable of degrading pollutants in a clean, effective, and less expensive process is of great importance. Phytoremedition approaches involving plant/bacteria interactions have been explored as an alternative, and halophyte vegetation has potential for use in phytoremedition of hydrocarbon contamination. Studies with plant species potentially suitable for microbe-assisted phytoremediation are widely represented in scientific literature. However, the in-depth understanding of the biological processes associated with the re-introduction of indigenous bacteria and plants and their performance in the degradation of hydrocarbons is still the limiting step for the application of these bioremediation solutions in a field context. The intent of the present review is to summarize the sources and effects of hydrocarbon contamination in estuarine environments, the strategies currently available for bioremediation (potential and limitations), and the perspectives of the use of halophyte plants in microbe-assisted phytoremediation approaches.
Author Address [Oliveira, Vanessa; Gomes, Newton C. M.; Almeida, Adelaide; Silva, Helena; Cunha, Angela] Univ Aveiro, Ctr Environm & Marine Studies CESAM, P-3810193 Aveiro, Portugal; [Oliveira, Vanessa; Gomes, Newton C. M.; Almeida, Adelaide; Silva, Helena; Cunha, Angela] Univ Aveiro, Dept Biol, P-3810193 Aveiro, Portugal; [Silva, Artur M. S.] Univ Aveiro, QOPNA, P-3810193 Aveiro, Portugal; [Silva, Artur M. S.] Univ Aveiro, Dept Chem, P-3810193 Aveiro, Portugal
Reprint Address Cunha, A (reprint author), Univ Aveiro, Ctr Environm & Marine Studies CESAM, Campus Univ Santiago, P-3810193 Aveiro, Portugal.
E-mail Address acunha@ua.pt
ResearcherID Number Almeida, Adelaide/D-9899-2011; Gomes, Newton/F-7430-2012; Silva, Artur/L-9222-2014; Oliveira, Vanessa/K-4593-2014
ORCID Number Almeida, Adelaide/0000-0002-8422-8664; Gomes, Newton/0000-0003-1934-0091; Silva, Artur/0000-0003-2861-8286; Oliveira, Vanessa/0000-0003-4223-0851
Funding Agency and Grant Number Centre for Environmental and Marine Studies, University of Aveiro (CESAM) [Pest C/MAR/LA0017/2011]; Portuguese Foundation for Science and Technology (FCT) [SFRH/BD/46977/2008]
Funding Text This work was supported by the Centre for Environmental and Marine Studies, University of Aveiro (CESAM, project Pest C/MAR/LA0017/2011). Financial support to V. Oliveira was provided by the Portuguese Foundation for Science and Technology (FCT) in the form of a PhD grant (SFRH/BD/46977/2008).
Cited References Afzal M, 2011, J HAZARD MATER, V186, P1568, DOI 10.1016/j.jhazmat.2010.12.040; Afzal M, 2012, INT J PHYTOREMEDIAT, V14, P35, DOI 10.1080/15226514.2011.552928; Afzal M, 2013, INT BIODETER BIODEGR, V85, P331, DOI 10.1016/j.ibiod.2013.08.022; Aislabie J, 2006, EXTREMOPHILES, V10, P171, DOI 10.1007/s00792-005-0498-4; Al-Mailem DM, 2010, BIORESOURCE TECHNOL, V101, P5786, DOI 10.1016/j.biortech.2010.02.082; Andria V, 2009, ENVIRON POLLUT, V157, P3347, DOI 10.1016/j.envpol.2009.08.023; Baek KH, 2009, J MICROBIOL BIOTECHN, V19, P339, DOI 10.4014/jmb.0807.423; Bamforth SM, 2005, J CHEM TECHNOL BIOT, V80, P723, DOI 10.1002/jctb.1276; Banks MK, 2003, ADV BIOCHEM ENG BIOT, V78, P75; Baptista I, 2011, AQUAT MICROB ECOL, V62, P299, DOI 10.3354/ame01472; Barac T, 2004, NAT BIOTECHNOL, V22, P583, DOI 10.1038/nbt960; Barbier EB, 2011, ECOL MONOGR, V81, P169, DOI 10.1890/10-1510.1; Bayoumi R, 2009, J APPL SCI RES, V5, P197; Beazley MJ, 2012, PLOS ONE, V7, DOI 10.1371/journal.pone.0041305; BERTRAND JC, 1993, J EXP MAR BIOL ECOL, V168, P125, DOI 10.1016/0022-0981(93)90119-9; Bowen JL, 2012, ISME J, V6, P2014, DOI 10.1038/ismej.2012.47; Carman KR, 1996, AQUAT MICROB ECOL, V10, P231, DOI 10.3354/ame010231; Castle DM, 2006, FEMS MICROBIOL ECOL, V56, P55, DOI 10.1111/j.1574-6941.2006.00062.x; Cerniglia Carl E., 1992, Biodegradation, V3, P351, DOI 10.1007/BF00129093; Colmer TD, 2008, NEW PHYTOL, V179, P964, DOI 10.1111/j.1469-8137.2008.02483.x; Costanza R, 1997, NATURE, V387, P253, DOI 10.1038/387253a0; Coulon F, 2007, ENVIRON MICROBIOL, V9, P177, DOI 10.1111/j.1462-2920.2006.01126.x; Couto MNPFS, 2011, CHEMOSPHERE, V84, P1052, DOI 10.1016/j.chemosphere.2011.04.069; Cunha MA, 2005, MICROBIOL RES, V160, P279, DOI 10.1016/j.micres.2005.02.001; Cunningham SD, 1996, ADV AGRON, V56, P55, DOI 10.1016/S0065-2113(08)60179-0; Curado G, 2014, INT J PHYTOREMEDIAT, V16, P1209, DOI 10.1080/15226514.2013.821451; Daane LL, 2001, APPL ENVIRON MICROB, V67, P2683, DOI 10.1128/AEM.67.6.2683-2691.2001; Das N, 2010, BIOTECHNOL RES INT, V2011, P1, DOI [10.4061/2011/941810, DOI 10.4061/2011/941810]; Diaz MP, 2000, MAR BIOTECHNOL, V2, P522, DOI 10.1007/s101260000037; EPA U, 2000, EPA600R99107; Fitzgerald EJ, 2003, ENVIRON POLLUT, V123, P67, DOI 10.1016/S0269-7491(02)00366-4; Flowers TJ, 2008, NEW PHYTOL, V179, P945, DOI 10.1111/j.1469-8137.2008.02531.x; Fox WM, 2001, MAR ENVIRON RES, V51, P213, DOI 10.1016/S0141-1136(00)00093-3; FREEMAN DJ, 1990, ENVIRON SCI TECHNOL, V24, P1581, DOI 10.1021/es00080a019; Frick C, 1999, TECHN SEM CHEM SPILL, p105a; Garbisu C, 2001, BIORESOURCE TECHNOL, V77, P229, DOI 10.1016/S0960-8524(00)00108-5; Genouw G., 1994, Biodegradation, V5, P37; Germaine K, 2004, FEMS MICROBIOL ECOL, V48, P109, DOI 10.1016/j.femsec.2003.12.009; Germaine KJ, 2006, FEMS MICROBIOL ECOL, V57, P302, DOI 10.1111/j.1574-6941.2006.00121.x; Germaine KJ, 2009, FEMS MICROBIOL LETT, V296, P226, DOI 10.1111/j.1574-6968.2009.01637.x; Gioia R, 2006, J ENVIRON MONITOR, V8, P700, DOI 10.1039/b604821h; Gomes NCM, 2008, FEMS MICROBIOL ECOL, V66, P96, DOI 10.1111/j.1574-6941.2008.00519.x; Gomes NCM, 2010, PLOS ONE, V11; Gurska J, 2009, ENVIRON SCI TECHNOL, V43, P4472, DOI 10.1021/es801540h; Habe H, 2003, BIOSCI BIOTECH BIOCH, V67, P225; Haritash AK, 2009, J HAZARD MATER, V169, P1, DOI 10.1016/j.jhazmat.2009.03.137; Hong SH, 2011, BIODEGRADATION, V22, P593, DOI 10.1007/s10532-010-9432-2; Hung GA, 2006, ENVIRON POLLUT, V142, P418, DOI 10.1016/j.envpol.2005.10.044; Iqbal J, 2007, ENVIRON TOXICOL CHEM, V26, P2001, DOI 10.1897/07-077.1; Juhanson J, 2009, FEMS MICROBIOL ECOL, V70, P446, DOI 10.1111/j.1574-6941.2009.00754.x; Kuiper I, 2004, MOL PLANT MICROBE IN, V17, P6, DOI 10.1094/MPMI.2004.17.1.6; Labbe D, 2007, FEMS MICROBIOL ECOL, V59, P466, DOI 10.1111/j.1574-6941.2006.00250.x; Lee SV, 2001, ESTUAR COAST SHELF S, V53, P619, DOI 10.1006/ecss.2000.0713; Lin QX, 2009, ECOL ENG, V35, P85, DOI 10.1016/j.ecoleng.2008.09.010; Lin QX, 1998, ECOL ENG, V10, P263, DOI 10.1016/S0925-8574(98)00015-9; Liu KL, 2001, J HAZARD MATER, V84, P175, DOI 10.1016/S0304-3894(01)00196-0; Liu WX, 2013, PLANT SOIL, V371, P533, DOI 10.1007/s11104-013-1717-x; Liu XY, 2011, ECOTOX ENVIRON SAFE, V74, P1967, DOI 10.1016/j.ecoenv.2011.06.005; Lodewyckx C, 2002, CRIT REV PLANT SCI, V21, P583, DOI 10.1080/0735-260291044377; Manousaki E, 2011, INT J PHYTOREMEDIAT, V13, P959, DOI 10.1080/15226514.2010.532241; Marques B, 2011, ENVIRON POLLUT, V159, P1869, DOI 10.1016/j.envpol.2011.03.036; Martins M, 2008, CHEMOSPHERE, V71, P1599, DOI 10.1016/j.chemosphere.2007.10.054; McGee BL, 1999, ENVIRON TOXICOL CHEM, V18, P2151, DOI 10.1897/1551-5028(1999)018<2151:AOSCAT>2.3.CO;2; Meudec A, 2006, CHEMOSPHERE, V65, P474, DOI 10.1016/j.chemosphere.2006.01.058; MILLE G, 1991, FRESEN J ANAL CHEM, V339, P788, DOI 10.1007/BF00321746; Minai-Tehrani D, 2009, B ENVIRON CONTAM TOX, V82, P179, DOI 10.1007/s00128-008-9548-9; Mitsch WJ, 2000, ECOL ECON, V35, P25, DOI 10.1016/S0921-8009(00)00165-8; Moreira SM, 2006, AQUAT TOXICOL, V78, P186, DOI 10.1016/j.aquatox.2006.03.001; Mucha AP, 2011, INT BIODETER BIODEGR, V65, P326, DOI 10.1016/j.ibiod.2010.12.005; Muratova AY, 2010, APPL BIOCHEM MICRO+, V46, P789, DOI 10.1134/S0003683810080090; O'Day PA, 2000, ENVIRON SCI TECHNOL, V34, P3665, DOI 10.1021/es9913030; Oliveira V, 2010, MICROB ECOL, V60, P167, DOI 10.1007/s00248-010-9678-6; Peng RH, 2008, FEMS MICROBIOL REV, V32, P927, DOI 10.1111/j.1574-6976.2008.00127.x; Phillips LA, 2006, SOIL BIOL BIOCHEM, V38, P2823, DOI 10.1016/j.soilbio.2006.04.038; Phillips LA, 2012, APPL SOIL ECOL, V52, P56, DOI 10.1016/j.apsoil.2011.10.009; Pilon-Smits E, 2005, ANNU REV PLANT BIOL, V56, P15, DOI 10.1146/annurev.arplant.56.032604.144214; Radwan SS, 2005, INT J PHYTOREMEDIAT, V7, P19, DOI 10.1080/16226510590915783; RamanaRao MV, 2012, MOL BIOTECHNOL, V51, P18, DOI 10.1007/s12033-011-9436-0; Ribeiro H, 2011, BIODEGRADATION, V22, P729, DOI 10.1007/s10532-010-9446-9; Riis V, 2003, CAN J MICROBIOL, V49, P713, DOI 10.1139/W03-083; Roesch LF, 2007, ISME J, V1, P283, DOI 10.1038/ismej.2007.53; Ryan RP, 2008, FEMS MICROBIOL LETT, V278, P1, DOI 10.1111/j.1574-6968.2007.00918.x; Samanta SK, 2002, TRENDS BIOTECHNOL, V20, P243, DOI 10.1016/S0167-7799(02)01943-1; Sanger DM, 1999, ARCH ENVIRON CON TOX, V37, P458, DOI 10.1007/s002449900540; Santos HF, 2011, WATER AIR SOIL POLL, V216, P329, DOI 10.1007/s11270-010-0536-4; Santos L, 2007, FEMS MICROBIOL ECOL, V60, P429, DOI 10.1111/j.1574-6941.2007.00304.x; Schneegurt MA, 1998, BIOTECHNOL APPL BIOC, V27, P73; Segura A, 2009, MICROB BIOTECHNOL, V2, P452, DOI 10.1111/j.1751-7915.2009.00113.x; Sheng XF, 2006, SOIL BIOL BIOCHEM, V38, P2587, DOI 10.1016/j.soilbio.2006.03.014; Simpson CD, 1996, SCI TOTAL ENVIRON, V181, P265, DOI 10.1016/0048-9697(95)05026-4; Sutton NB, 2013, APPL ENVIRON MICROB, V79, P619, DOI 10.1128/AEM.02747-12; Taghavi S, 2005, APPL ENVIRON MICROB, V71, P8500, DOI 10.1128/AEM.71.12.8500-8505.2005; Todd GD, 1999, TOXICOLOGICAL PROFIL; Trapp S., 2001, Journal of Soils and Sediments, V1, P37, DOI 10.1007/BF02986468; Valega M, 2008, CHEMOSPHERE, V73, P1224, DOI 10.1016/j.chemosphere.2008.07.053; Valiela I, 2004, J EXP MAR BIOL ECOL, V300, P131, DOI 10.1016/j.jembe.2003.12.023; Vane CH, 2007, SCI TOTAL ENVIRON, V374, P112, DOI 10.1016/j.scitotenv.2006.12.036; Vazquez S, 2009, MICROB ECOL, V57, P598, DOI 10.1007/s00248-008-9420-9; Venosa AD, 2003, SPILL SCI TECHNOL B, V8, P163, DOI 10.1016/S1353-2561(03)00019-7; VERNBERG FJ, 1993, ENVIRON TOXICOL CHEM, V12, P2167, DOI 10.1897/1552-8618(1993)12[2167:SPAR]2.0.CO;2; Wang Y, 2012, APPL ENVIRON MICROB, V78, P8264, DOI 10.1128/AEM.01821-12; Watts AW, 2006, CHEMOSPHERE, V62, P1253, DOI 10.1016/j.chemopshere.2005.07.006; Wick AF, 2011, REMEDIATION PAH CONT; Yergeau E, 2009, APPL ENVIRON MICROB, V75, P6258, DOI 10.1128/AEM.01029-09; Yousaf S, 2011, ENVIRON POLLUT, V159, P2675, DOI 10.1016/j.envpol.2011.05.031; Yousaf S, 2010, J APPL MICROBIOL, V109, P1389, DOI 10.1111/j.1365-2672.2010.04768.x; Zhang W, 2013, GEOMICROBIOL J, V30, P593, DOI 10.1080/01490451.2012.740145; Zhang WG, 2009, ENVIRON POLLUT, V157, P1533, DOI 10.1016/j.envpol.2009.01.007; Zhong Y, 2007, APPL MICROBIOL BIOT, V75, P175, DOI 10.1007/s00253-006-0789-4
Cited Reference Count 109
Publisher SPRINGER
Publisher City NEW YORK
Publisher Address 233 SPRING ST, NEW YORK, NY 10013 USA
ISSN 0095-3628
29-Character Source Abbreviation MICROB ECOL
ISO Source Abbreviation Microb. Ecol.
Publication Date JAN
Year Published 2015
Volume 69
Issue 1
Beginning Page 1
Ending Page 12
Digital Object Identifier (DOI) 10.1007/s00248-014-0455-9
Page Count 12
Web of Science Category Ecology; Marine & Freshwater Biology; Microbiology
Subject Category Environmental Sciences & Ecology; Marine & Freshwater Biology; Microbiology
Document Delivery Number AY6WW
Unique Article Identifier WOS:000347704500001
Plants associated with this reference

LEGAL NOTICES — This website is protected by Copyright © The University of Sussex, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019. The eHALOPH database is protected by Database Right and Copyright © The University of Sussex and other contributors, 2006, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019. This database is based on an earlier work by James Aronson.
THIS WEBSITE AND THIS DATABASE ARE PROVIDED ON AN "AS IS" BASIS, AND YOU USE THEM AND RELY ON THEM AT YOUR OWN RISK.

Contact email: halophytes@sussex.ac.uk
Credits – Tim Flowers, Joaquim Santos, Moritz Jahns, Brian Warburton, Peter Reed