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Publication Type J
Authors Tang, X. L., H. Y. Wang, C. Y. Shao and H. B. Shao
Title Global Gene Expression of Kosteletzkya virginica Seedlings Responding to Salt Stress
Source Plos One
Author Keywords TRANSCRIPTION FACTOR SALINITY TOLERANCE BETULA-PLATYPHYLLA SEASHORE MALLOW ARABIDOPSIS DROUGHT COLD ACID BIODIESEL PROFILE
Abstract Soil salinization is becoming a serious threat to crop yield all over the world. Nowadays, acquainting the specific molecular mechanisms underlying various abiotic stresses especially to salt stress should be of great importance. While the development of the high-throughout sequencing technology promoted the progress powerfully. The intricate perception, transduction and regulation mechanisms underlying salt stress are being illustrated more and more clearly. As a perennial halophytic plant, Kosteletzkya virginica is able to help us to understand the mechanisms more directly and effectively. We carried out the whole transcriptome analysis on young seedlings with or without salt treatment through high-throughout sequencing technology. The results revealed that the numbers of different expressed transcripts between control and different treatments are 4145 and 9134, respectively. The ORF prediction suggested that there were 94308 ORF out of the 103489 (91.10%) total transcripts. We also carried out further differential expression analysis through gene ontology (GO) classification, cluster of orthologous groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. In a word, our transcriptome study on Kosteletzkya virginica would provide direct and effective references for researches on molecular mechanisms of salt-tolerance, extending our view of salt tolerance in plant further. Above all, the related report in this paper is the first about Kosteletzkya virginica.
Author Address [Tang, Xiaoli; Wang, Hongyan; Shao, Hongbo] Chinese Acad Sci, Yantai Inst Coastal Zone Res YIC, Key Lab Coastal Biol & Bioresources Utilizat, Yantai 264003, Peoples R China. [Shao, Hongbo] Jiangsu Acad Agr Sci, Inst Biotechnol, Nanjing 210014, Peoples R China. [Wang, Hongyan] China Agr Univ, Yantai Acad, Yantai 264670, Peoples R China. [Shao, Chuyang] Shandong Agr Univ, Tai An 271018, Shandong, Peoples R China. [Tang, Xiaoli; Wang, Hongyan] Univ Chinese Acad Sci, Beijing 100049, Peoples R China. Shao, HB (reprint author), Chinese Acad Sci, Yantai Inst Coastal Zone Res YIC, Key Lab Coastal Biol & Bioresources Utilizat, Yantai 264003, Peoples R China. shaohongbochu@126.com
ISSN 1932-6203
ISBN 1932-6203
29-Character Source Abbreviation PLoS One
Publication Date Apr
Year Published 2015
Volume 10
Issue 4
Digital Object Identifier (DOI) 10.1371/journal.pone.0124421
Unique Article Identifier WOS:000353331500085
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